Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: Pp3c5_1590

.

Location

Chromosome 5: 990,207-994,612 reverse strand.

About this gene

This gene has 8 transcripts (splice variants), 239 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c5_1590V3.1	1901	250aa	Pp3c5_1590V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SF12	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c5_1590V3.8	1360	250aa	Pp3c5_1590V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SF12	-
-	Pp3c5_1590V3.5	1329	250aa	Pp3c5_1590V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SF12	-
-	Pp3c5_1590V3.6	1323	196aa	Pp3c5_1590V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DYH4	-
-	Pp3c5_1590V3.4	1204	250aa	Pp3c5_1590V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SF12	-
-	Pp3c5_1590V3.7	1088	203aa	Pp3c5_1590V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DQL8	-
-	Pp3c5_1590V3.3	1040	250aa	Pp3c5_1590V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SF12	-
-	Pp3c5_1590V3.2	1036	250aa	Pp3c5_1590V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SF12	-

.

Summary

.

.