Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c1_20580

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Location

Chromosome 1: 15,641,410-15,647,346 reverse strand.

About this gene

This gene has 12 transcripts (splice variants), 518 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c1_20580V3.10	4128	606aa	Pp3c1_20580V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQ47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_20580V3.8	4758	557aa	Pp3c1_20580V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L8V5	-
-	Pp3c1_20580V3.7	4185	557aa	Pp3c1_20580V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L8V5	-
-	Pp3c1_20580V3.6	4153	557aa	Pp3c1_20580V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L8V5	-
-	Pp3c1_20580V3.5	4017	557aa	Pp3c1_20580V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L8V5	-
-	Pp3c1_20580V3.1	3998	557aa	Pp3c1_20580V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L8V5	-
-	Pp3c1_20580V3.4	3985	557aa	Pp3c1_20580V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L8V5	-
-	Pp3c1_20580V3.3	3966	557aa	Pp3c1_20580V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L8V5	-
-	Pp3c1_20580V3.12	3963	590aa	Pp3c1_20580V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BT59	-
-	Pp3c1_20580V3.2	3880	557aa	Pp3c1_20580V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L8V5	-
-	Pp3c1_20580V3.9	3813	606aa	Pp3c1_20580V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQ47	-
-	Pp3c1_20580V3.11	2742	557aa	Pp3c1_20580V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L8V5	-

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Summary

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