Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c16_8090

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Location

Chromosome 16: 5,041,149-5,047,588 reverse strand.

About this gene

This gene has 13 transcripts (splice variants), 2 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c16_8090V3.7	3750	257aa	Pp3c16_8090V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4B9D9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c16_8090V3.3	4711	254aa	Pp3c16_8090V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J7L6	-
-	Pp3c16_8090V3.2	4706	254aa	Pp3c16_8090V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J7L6	-
-	Pp3c16_8090V3.8	3884	254aa	Pp3c16_8090V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J7L6	-
-	Pp3c16_8090V3.1	3557	254aa	Pp3c16_8090V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J7L6	-
-	Pp3c16_8090V3.6	3223	257aa	Pp3c16_8090V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4B9D9	-
-	Pp3c16_8090V3.5	3218	257aa	Pp3c16_8090V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4B9D9	-
-	Pp3c16_8090V3.10	2593	254aa	Pp3c16_8090V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J7L6	-
-	Pp3c16_8090V3.9	2588	254aa	Pp3c16_8090V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J7L6	-
-	Pp3c16_8090V3.12	2130	257aa	Pp3c16_8090V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4B9D9	-
-	Pp3c16_8090V3.13	2121	254aa	Pp3c16_8090V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J7L6	-
-	Pp3c16_8090V3.4	1995	254aa	Pp3c16_8090V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1J7L6	-
-	Pp3c16_8090V3.11	1339	257aa	Pp3c16_8090V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4B9D9	-

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Summary

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