Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c5_14260

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Location

Chromosome 5: 10,153,362-10,159,200 reverse strand.

About this gene

This gene has 12 transcripts (splice variants), 1172 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Pp3c5_14260V3.2	3742	534aa	Pp3c5_14260V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TRH9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c5_14260V3.1	3495	534aa	Pp3c5_14260V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TRH9	-	-
-	Pp3c5_14260V3.11	3091	534aa	Pp3c5_14260V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TRH9	-	-
-	Pp3c5_14260V3.9	3044	404aa	Pp3c5_14260V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c5_14260V3.8	2945	404aa	Pp3c5_14260V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c5_14260V3.7	2798	534aa	Pp3c5_14260V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TRH9	-	-
-	Pp3c5_14260V3.6	2716	534aa	Pp3c5_14260V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TRH9	-	-
-	Pp3c5_14260V3.5	2699	534aa	Pp3c5_14260V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TRH9	-	-
-	Pp3c5_14260V3.4	2663	534aa	Pp3c5_14260V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TRH9	-	-
-	Pp3c5_14260V3.3	2597	534aa	Pp3c5_14260V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TRH9	-	-
-	Pp3c5_14260V3.12	2363	404aa	Pp3c5_14260V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c5_14260V3.10	2288	534aa	Pp3c5_14260V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TRH9	-	-

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Summary

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