Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c5_3840

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Location

Chromosome 5: 2,638,303-2,643,848 reverse strand.

About this gene

This gene has 13 transcripts (splice variants), 12 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c5_3840V3.4	3026	690aa	Pp3c5_3840V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KIC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c5_3840V3.13	2986	557aa	Pp3c5_3840V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c5_3840V3.3	2972	690aa	Pp3c5_3840V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KIC7	-
-	Pp3c5_3840V3.12	2931	557aa	Pp3c5_3840V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c5_3840V3.7	2919	648aa	Pp3c5_3840V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c5_3840V3.1	2879	690aa	Pp3c5_3840V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KIC7	-
-	Pp3c5_3840V3.11	2878	557aa	Pp3c5_3840V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c5_3840V3.6	2749	648aa	Pp3c5_3840V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c5_3840V3.10	2713	557aa	Pp3c5_3840V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S1G1	-
-	Pp3c5_3840V3.2	2653	690aa	Pp3c5_3840V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KIC7 A9S1G1	-
-	Pp3c5_3840V3.9	2612	557aa	Pp3c5_3840V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c5_3840V3.5	2600	648aa	Pp3c5_3840V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c5_3840V3.8	2559	557aa	Pp3c5_3840V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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