Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c22_6380

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Location

Chromosome 22: 3,756,956-3,762,866 reverse strand.

About this gene

This gene has 14 transcripts (splice variants), 205 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Pp3c22_6380V3.6	2703	538aa	Pp3c22_6380V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RJA4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c22_6380V3.10	2708	469aa	Pp3c22_6380V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c22_6380V3.14	2483	538aa	Pp3c22_6380V3.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RJA4	-	-
-	Pp3c22_6380V3.9	2355	469aa	Pp3c22_6380V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c22_6380V3.5	2338	538aa	Pp3c22_6380V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RJA4	-	-
-	Pp3c22_6380V3.4	2294	538aa	Pp3c22_6380V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RJA4	-	-
-	Pp3c22_6380V3.3	2270	538aa	Pp3c22_6380V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RJA4	-	-
-	Pp3c22_6380V3.2	2200	538aa	Pp3c22_6380V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RJA4	-	-
-	Pp3c22_6380V3.8	2151	469aa	Pp3c22_6380V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c22_6380V3.7	2143	469aa	Pp3c22_6380V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c22_6380V3.1	2095	538aa	Pp3c22_6380V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RJA4	-	-
-	Pp3c22_6380V3.11	2045	469aa	Pp3c22_6380V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c22_6380V3.13	1901	500aa	Pp3c22_6380V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c22_6380V3.12	1710	439aa	Pp3c22_6380V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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