Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: Pp3c1_28350

.

Location

Chromosome 1: 20,195,942-20,199,522 reverse strand.

About this gene

This gene has 15 transcripts (splice variants), 277 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	Pp3c1_28350V3.3	2567	188aa	Pp3c1_28350V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_28350V3.2	2772	185aa	Pp3c1_28350V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RQ53	-	-
-	Pp3c1_28350V3.1	2638	185aa	Pp3c1_28350V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RQ53	-	-
-	Pp3c1_28350V3.10	1816	127aa	Pp3c1_28350V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c1_28350V3.7	1767	162aa	Pp3c1_28350V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c1_28350V3.11	1642	119aa	Pp3c1_28350V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c1_28350V3.6	1633	162aa	Pp3c1_28350V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c1_28350V3.8	1620	185aa	Pp3c1_28350V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RQ53	-	-
-	Pp3c1_28350V3.5	1562	162aa	Pp3c1_28350V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c1_28350V3.12	1448	142aa	Pp3c1_28350V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c1_28350V3.9	1420	183aa	Pp3c1_28350V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c1_28350V3.4	1390	162aa	Pp3c1_28350V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	Pp3c1_28350V3.13	1271	185aa	Pp3c1_28350V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RQ53	-	-
-	Pp3c1_28350V3.15	1185	185aa	Pp3c1_28350V3.15	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9RQ53	-	-
-	Pp3c1_28350V3.14	1150	162aa	Pp3c1_28350V3.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

.

Summary

.

.