Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: Pp3c11_5280

.

Location

Chromosome 11: 3,369,757-3,372,315 reverse strand.

About this gene

This gene has 12 transcripts (splice variants), 2 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c11_5280V3.1	1886	337aa	Pp3c11_5280V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1JTJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c11_5280V3.12	2091	200aa	Pp3c11_5280V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c11_5280V3.8	1969	291aa	Pp3c11_5280V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c11_5280V3.10	1892	250aa	Pp3c11_5280V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c11_5280V3.6	1854	337aa	Pp3c11_5280V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1JTJ2	-
-	Pp3c11_5280V3.11	1817	225aa	Pp3c11_5280V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c11_5280V3.7	1779	312aa	Pp3c11_5280V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c11_5280V3.3	1662	197aa	Pp3c11_5280V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9TZR4	-
-	Pp3c11_5280V3.9	1433	188aa	Pp3c11_5280V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c11_5280V3.5	1395	275aa	Pp3c11_5280V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c11_5280V3.4	1321	250aa	Pp3c11_5280V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c11_5280V3.2	1136	197aa	Pp3c11_5280V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.