Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: HMGB1 Os06g0728000

.

Location

Chromosome 6: 30,993,280-30,995,120 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 88 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
HMGB1-202	Os06t0728000-02	997	157aa	Os06t0728000-02	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B9FR00 Q5Z7N3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HMGB1-201	Os06t0728000-01	913	157aa	Os06t0728000-01	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B9FR00 Q5Z7N3	-

.

Summary

.

.