Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: OPUNC09G14780.1

Description

cell division cycle protein 48-related / CDC48-related [Source:Projected from Arabidopsis thaliana (AT1G05910) TAIR;Acc:AT1G05910]

Location

About this transcript

This transcript has 11 exons, is annotated with 40 domains and features and maps to 39 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	OPUNC09G14780.1	5691	1199aa	OPUNC09G14780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0M3D2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	OPUNC09G14780.2	5502	1191aa	OPUNC09G14780.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0M3D4	-
-	OPUNC09G14780.3	5365	1191aa	OPUNC09G14780.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0M3D4	-
-	OPUNC09G14780.4	3558	917aa	OPUNC09G14780.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0E0M3D5	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 5,691 bps, Translation length: 1,199 residues

Version

OPUNC09G14780.1

Type

Protein coding

Annotation Method

Gene annotation by Oryza Genome Evolution project (OGE) through MAKER gene annotation pipeline.