Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT5G56900.2 AT5G56900-201

Description

CwfJ-like family protein / zinc finger (CCCH-type) family protein [Source:NCBI gene (formerly Entrezgene);Acc:835792]

Location

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features and is associated with 247 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G56900-201	AT5G56900.2	2295	596aa	AT5G56900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q84WU9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G56900-203	AT5G56900.1	2206	404aa	AT5G56900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K948	-	-
AT5G56900-202	AT5G56900.3	2178	503aa	AT5G56900.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B9K8	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,295 bps, Translation length: 596 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q84WU9

Version

AT5G56900.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.