Transcript: AT5G52790.3 AT5G52790-201

Description

CBS domain protein with a domain protein (DUF21) [Source:NCBI gene (formerly Entrezgene);Acc:835356]

Location

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 246 variant alleles and maps to 41 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G52790-204	AT5G52790.1	2350	500aa	AT5G52790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9YDE8 Q9LTD8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G52790-203	AT5G52790.4	2412	411aa	AT5G52790.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BGT2	-	-
AT5G52790-202	AT5G52790.2	2203	393aa	AT5G52790.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BGS5	-	-
AT5G52790-201	AT5G52790.3	2141	393aa	AT5G52790.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BGS5	-	-
AT5G52790-205	AT5G52790.5	1623	457aa	AT5G52790.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BGT4	-	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,141 bps, Translation length: 393 residues

Version

AT5G52790.3

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.