Transcript: AT4G38380.5 AT4G38380-204

Description

MATE efflux family protein [Source:NCBI gene (formerly Entrezgene);Acc:829995]

Location

About this transcript

This transcript has 15 exons, is annotated with 17 domains and features, is associated with 214 variant alleles and maps to 40 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT4G38380-201	AT4G38380.2	2354	560aa	AT4G38380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9XZR1 Q9SVE7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT4G38380-202	AT4G38380.3	2325	488aa	AT4G38380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B921	-	-
AT4G38380-205	AT4G38380.4	2287	450aa	AT4G38380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B923	-	-
AT4G38380-203	AT4G38380.1	2273	560aa	AT4G38380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9XZR1 Q9SVE7	-	-
AT4G38380-204	AT4G38380.5	2243	550aa	AT4G38380.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B902	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,243 bps, Translation length: 550 residues

Version

AT4G38380.5

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.