Transcript: AT3G54500.4 AT3G54500-201

Description

agglutinin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824615]

Location

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 185 variant alleles and maps to 42 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G54500-204	AT3G54500.3	2333	680aa	AT3G54500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2H1ZEL2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G54500-205	AT3G54500.2	2522	453aa	AT3G54500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2H1ZEK6	-	-
AT3G54500-201	AT3G54500.4	2452	663aa	AT3G54500.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JCX9	-	-
AT3G54500-202	AT3G54500.1	2330	648aa	AT3G54500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2ESR7	-	-
AT3G54500-208	AT3G54500.5	2283	649aa	AT3G54500.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9XLJ2	-	-
AT3G54500-206	AT3G54500.6	2246	569aa	AT3G54500.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT3G54500-207	AT3G54500.7	2147	649aa	AT3G54500.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9XLJ2	-	-
AT3G54500-203	AT3G54500.8	2067	569aa	AT3G54500.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 2,452 bps, Translation length: 663 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F4JCX9

Version

AT3G54500.4

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.