Transcript: AT3G51880.2 HMGB1-202

Description

high mobility group B1 [Source:NCBI gene (formerly Entrezgene);Acc:824351]

Location

About this transcript

This transcript has 8 exons, is annotated with 16 domains and features, is associated with 199 variant alleles and maps to 38 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
HMGB1-202	AT3G51880.2	983	185aa	AT3G51880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HMGB1-204	AT3G51880.1	1025	178aa	AT3G51880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O49595	-	-
HMGB1-201	AT3G51880.3	997	178aa	AT3G51880.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O49595	-	-
HMGB1-203	AT3G51880.5	917	178aa	AT3G51880.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O49595	-	-
HMGB1-205	AT3G51880.4	822	161aa	AT3G51880.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J5M5	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 983 bps, Translation length: 185 residues

Version

AT3G51880.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.