Transcript: AT2G38880.2 NF-YB1-206

Description

nuclear factor Y, subunit B1 [Source:NCBI gene (formerly Entrezgene);Acc:818472]

Location

Chromosome 2: 16,238,401-16,240,883 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 174 variant alleles and maps to 41 oligo probes.

Gene

This transcript is a product of gene AT2G38880 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
NF-YB1-209	AT2G38880.8	909	164aa	AT2G38880.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654F1G8 F4ITZ0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
NF-YB1-203	AT2G38880.9	1539	153aa	AT2G38880.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KRF5 B6EUB6	-	-
NF-YB1-202	AT2G38880.6	1451	153aa	AT2G38880.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KRF5 B6EUB6	-	-
NF-YB1-206	AT2G38880.2	1185	141aa	AT2G38880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2ECN1 A6XB86 Q9SLG0	-	-
NF-YB1-211	AT2G38880.4	1047	112aa	AT2G38880.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4ITZ6	-	-
NF-YB1-204	AT2G38880.5	1033	141aa	AT2G38880.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2ECN1 A6XB86 Q9SLG0	-	-
NF-YB1-201	AT2G38880.3	993	140aa	AT2G38880.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3EBK1	-	-
NF-YB1-205	AT2G38880.1	971	141aa	AT2G38880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2ECN1 A6XB86 Q9SLG0	-	-
NF-YB1-210	AT2G38880.11	847	164aa	AT2G38880.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654F1G8 F4ITZ0	-	-
NF-YB1-207	AT2G38880.10	709	153aa	AT2G38880.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384KRF5 B6EUB6	-	-
NF-YB1-208	AT2G38880.7	669	139aa	AT2G38880.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4ITZ4	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,185 bps, Translation length: 141 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9SLG0

Version

AT2G38880.2

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.

Transcript: AT2G38880.2 NF-YB1-206

Summary

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Transcript: AT2G38880.2 NF-YB1-206

Summary

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