Transcript: AT1G51340.5 AT1G51340-204

Description

MATE efflux family protein [Source:NCBI gene (formerly Entrezgene);Acc:841557]

Location

About this transcript

This transcript has 12 exons, is annotated with 19 domains and features, is associated with 323 variant alleles and maps to 44 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G51340-201	AT1G51340.2	2614	515aa	AT1G51340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W9H8 Q9SYD6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G51340-202	AT1G51340.3	2255	515aa	AT1G51340.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W9H8 Q9SYD6	-	-
AT1G51340-204	AT1G51340.5	1968	515aa	AT1G51340.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W9H8 Q9SYD6	-	-
AT1G51340-203	AT1G51340.4	1906	397aa	AT1G51340.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AU65	-	-
AT1G51340-205	AT1G51340.1	1849	509aa	AT1G51340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,968 bps, Translation length: 515 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9SYD6

Version

AT1G51340.5

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.