Transcript: AT1G48090.1 AT1G48090-203

Description

calcium-dependent lipid-binding family protein [Source:NCBI gene (formerly Entrezgene);Acc:841226]

Location

About this transcript

This transcript has 67 exons, is annotated with 22 domains and features, is associated with 1925 variant alleles and maps to 79 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G48090-202	AT1G48090.2	13076	4173aa	AT1G48090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMQ1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G48090-204	AT1G48090.3	13023	4154aa	AT1G48090.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMP6	-	-
AT1G48090-205	AT1G48090.4	13017	4132aa	AT1G48090.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMP4 A0A384LIM1	-	-
AT1G48090-203	AT1G48090.1	12995	4146aa	AT1G48090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4HWS2	-	-
AT1G48090-206	AT1G48090.6	12880	4132aa	AT1G48090.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMP4 A0A384LIM1	-	-
AT1G48090-201	AT1G48090.5	12872	4105aa	AT1G48090.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMQ8	-	-

Summary

Statistics

Exons: 67, Coding exons: 66, Transcript length: 12,995 bps, Translation length: 4,146 residues

Version

AT1G48090.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.