Transcript: AT1G06580.1 AT1G06580-201

Description

Pentatricopeptide repeat (PPR) superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:837169]

Location

About this transcript

This transcript has 1 exon, is annotated with 46 domains and features, is associated with 172 variant alleles and maps to 43 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G06580-201	AT1G06580.1	2278	500aa	AT1G06580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9SHK2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G06580-203	AT1G06580.2	2078	394aa	AT1G06580.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AN74	-	-
AT1G06580-202	AT1G06580.3	2075	394aa	AT1G06580.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AN74	-	-

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,278 bps, Translation length: 500 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9SHK2

Version

AT1G06580.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.