Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G61080

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Description

Hydroxyproline-rich glycoprotein family protein [Source:NCBI gene (formerly Entrezgene);Acc:842400]

Gene Synonyms

T7P1.21, T7P1_21

Location

Chromosome 1: 22,492,878-22,497,267 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 119 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G61080-204	AT1G61080.5	3150	944aa	AT1G61080.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWR9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G61080-201	AT1G61080.2	3360	943aa	AT1G61080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWR5	-	-
AT1G61080-203	AT1G61080.3	3134	931aa	AT1G61080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWV2	-	-
AT1G61080-202	AT1G61080.4	3133	932aa	AT1G61080.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWV6	-	-
AT1G61080-205	AT1G61080.6	3108	940aa	AT1G61080.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWV5	-	-
AT1G61080-206	AT1G61080.1	2785	907aa	AT1G61080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9C946	-	-

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Summary

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