Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AT1G48580

.

Description

nuclear localized protein [Source:NCBI gene (formerly Entrezgene);Acc:841279]

Gene Synonyms

T1N15.20, T1N15_20

Location

Chromosome 1: 17,957,942-17,960,916 reverse strand.

About this gene

This gene has 3 transcripts (splice variants) and 97 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G48580-201	AT1G48580.2	1999	457aa	AT1G48580.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8ANI6 A0A384KLI7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G48580-202	AT1G48580.3	1945	457aa	AT1G48580.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8ANI6 A0A384KLI7	-	-
AT1G48580-203	AT1G48580.1	1505	454aa	AT1G48580.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4HYI1	-	-

.

Summary

.

.