Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: RCF3 AT5G53060

.

Description

RNA-binding KH domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:835386]

Gene Synonyms

MNB8.12, MNB8_12, regulator of CBF gene expression 3, SHI1, SHINY 1

Location

Chromosome 5: 21,514,896-21,520,421 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 97 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RCF3-201	AT5G53060.1	2768	652aa	AT5G53060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UIE3 Q8W4B1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
RCF3-202	AT5G53060.3	2081	568aa	AT5G53060.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BB62	-	-
RCF3-203	AT5G53060.2	1037	198aa	AT5G53060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4KIZ8	-	-

.

Summary

.

.