Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AT5G43870

.

Description

auxin canalization protein (DUF828) [Source:NCBI gene (formerly Entrezgene);Acc:834409]

Gene Synonyms

F6B6.1, F6B6_1

Location

Chromosome 5: 17,631,426-17,635,945 reverse strand.

About this gene

This gene has 2 transcripts (splice variants), 201 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G43870-201	AT5G43870.1	2526	453aa	AT5G43870.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9LKC2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G43870-202	AT5G43870.2	2058	386aa	AT5G43870.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BFB6	-	-

.

Summary

.

.