Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G62290

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Description

Saposin-like aspartyl protease family protein [Source:NCBI gene (formerly Entrezgene);Acc:842526]

Gene Synonyms

F19K23.21, F19K23_21

Location

Chromosome 1: 23,009,885-23,013,601 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 318 orthologues and 68 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G62290-201	AT1G62290.2	1861	513aa	AT1G62290.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9WNL7 Q8VYL3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G62290-205	AT1G62290.3	2017	420aa	AT1G62290.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AVH3	-	-
AT1G62290-206	AT1G62290.4	1932	463aa	AT1G62290.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AVE7	-	-
AT1G62290-202	AT1G62290.5	1897	486aa	AT1G62290.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AVA7	-	-
AT1G62290-203	AT1G62290.6	1894	463aa	AT1G62290.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AVE7	-	-
AT1G62290-204	AT1G62290.1	1825	513aa	AT1G62290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9WNL7 Q8VYL3	-	-

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Summary

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