Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: VIM1 AT1G57820

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Description

Zinc finger (C3HC4-type RING finger) family protein [Source:NCBI gene (formerly Entrezgene);Acc:842157]

Gene Synonyms

F12K22.14, F12K22_14, ORTH2, ORTHRUS 2, VARIANT IN METHYLATION 1

Location

Chromosome 1: 21,413,981-21,418,115 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 199 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
VIM1-201	AT1G57820.1	2433	645aa	AT1G57820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8VYZ0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
VIM1-202	AT1G57820.3	2419	645aa	AT1G57820.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8VYZ0	-	-
VIM1-203	AT1G57820.2	2136	642aa	AT1G57820.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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