Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: CIB5 AT1G26260

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Description

cryptochrome-interacting basic-helix-loop-helix 5 [Source:NCBI gene (formerly Entrezgene);Acc:839167]

Gene Synonyms

cryptochrome-interacting basic-helix-loop-helix 5, F28B23.8, F28B23_8

Location

Chromosome 1: 9,086,804-9,089,375 forward strand.

About this gene

This gene has 6 transcripts (splice variants), 218 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CIB5-202	AT1G26260.1	1923	390aa	AT1G26260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WLZ9 Q9C670	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CIB5-205	AT1G26260.5	1944	373aa	AT1G26260.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AVX7	-	-
CIB5-203	AT1G26260.6	1816	390aa	AT1G26260.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WLZ9 Q9C670	-	-
CIB5-204	AT1G26260.2	1667	390aa	AT1G26260.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WLZ9 Q9C670	-	-
CIB5-201	AT1G26260.4	1657	390aa	AT1G26260.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178WLZ9 Q9C670	-	-
CIB5-206	AT1G26260.3	1420	339aa	AT1G26260.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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